Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015908394.1_cds_XP_016458524.1_52143
CDS Infomation

[gene=LOC107782184] [db_xref=GeneID:107782184] [protein=protein DJ-1 homolog C-like] [protein_id=XP_016458524.1] [location=join(44825..45040,45125..45325,45808..45957,46046..46225,46737..46814,47441..47641,47824..47961,48034..48243)] [gbkey=CDS]
Sequence

ATGAAGTCCATATCGCCCCTGTTCTCGGTTTCCACTCCCAAGTCTCCAATTCTCATCTTC
ACTCCTATTTCCCAAAGACTTTCATCTGTCAAATTCGCAGCCTCTCCACAGCGAAAGTCA
CCATCCTCAAAATCAGCTAAAACACTGTGCACAACACTTACCGTGGATCCCATAACTACG
CGCACATCTACTTCCACTTCCACCCCTCCCAAAAAGGTTCTTCTGCCAATTGGATTTGGC
ACTGAAGAAATGGAAGCTGTAATATTGGCTGATGTTCTGCGCCGGGCTGGTGCAGAGGTA
ACAGTTGCGTCAGTAGAGCAGCAATTGGAGGTTGAAGCTTCTGGAGGCACTAGGCTAGTT
GCTGATACGTTCATCTCTGCTTGTTCCACTCAAATATATGATCTTGTTGCATTGCCGGGA
GGAATGCCAGGTTCTGCTCGTTTAAGAGATTGTGAAGTTCTTAAGAAGATCACAAGCAGG
CAAGCTGAGGAGAAGCGACTTTATGGTGCCATATGCGCTGCTCCAGCAGTCACTCTTTTG
CCTTGGGGTCTTCTCAAGAGGAAACAGTCCACTTGTCATCCTGCATTTATGGACAAAATT
CCATCCTTCCGGGCGGTGAAAACTAGCACTCAAGTCTCTGGGGAGCTAACAACAAGCCGT
GGTCCTGGTACTTCATTTGAGTTTGCCGTATGTTTAGTGGATCAGCTGTTTGGTGAGTCT
GTTGCCAAAGAAATTGGAGAACTATTGTTAATGAATCCCGCAGACGATGACCCAAAGAGA
CAAGAATTTAATGAAGTTGGATGGTCTCTAGATCACACCCCGCAAGTGCTCATTCCAGTA
GCTAACGGGTCTGAAGAAATTGAAGTTGTTACGTTGATAGACATTCTAAGACGAGCAAAG
GTGAATGTTGTGGTGGCTTCAGTGGAAAAATCAGCACAGGTCTTGGCATCAAGTGGAACT
AAAATTGTTGCAGACAAGTTGATTGATGCTACTGCTGACTCCATATATGACTTGATTATC
CTCCCGGGAGGAACTGCTGGGGCTGAACGACTGCACAAGTCAAAAGTTCTGAAGAAGTTG
CTTAAGGAACAAGAATCAGCCGGAAGAATATTTGGTGCAATCTGCTCTTCACCTGCAGTC
TTGCAGAGACAGGGGTTAATAAAGGACAAGAAAACCACTGCACATCCTGCCGTCATAAAC
AATCTCAAAGATGGGGTGAATGATGCTCGAGTAGTTATTGATGGTAAACTCATCACAAGC
CAGGGACTTGCTACAGCAACACAGTTTGCATTGGCTATTGTGAGCAAGCTTTTCGGGCAT
GCAAGGGCAAGGAGTGTAGCAGAAGGCCTTGTCTATCAGTACCCTAGGAGCTAG

Peptide Sequence

PEP ID

XP_016458524.1
PEP Infomation

PREDICTED: protein DJ-1 homolog C-like [Nicotiana tabacum]
Sequence

MKSISPLFSVSTPKSPILIFTPISQRLSSVKFAASPQRKSPSSKSAKTLCTTLTVDPITT
RTSTSTSTPPKKVLLPIGFGTEEMEAVILADVLRRAGAEVTVASVEQQLEVEASGGTRLV
ADTFISACSTQIYDLVALPGGMPGSARLRDCEVLKKITSRQAEEKRLYGAICAAPAVTLL
PWGLLKRKQSTCHPAFMDKIPSFRAVKTSTQVSGELTTSRGPGTSFEFAVCLVDQLFGES
VAKEIGELLLMNPADDDPKRQEFNEVGWSLDHTPQVLIPVANGSEEIEVVTLIDILRRAK
VNVVVASVEKSAQVLASSGTKIVADKLIDATADSIYDLIILPGGTAGAERLHKSKVLKKL
LKEQESAGRIFGAICSSPAVLQRQGLIKDKKTTAHPAVINNLKDGVNDARVVIDGKLITS
QGLATATQFALAIVSKLFGHARARSVAEGLVYQYPRS

Transcript Sequence

Gene sequence data has not been registered.